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Publication Year: 2025

191 to 200 of 20,069 Results

2024.003D.Polyomaviridae_4ns.csv Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Comma Separated Values - 2.1 KB - MD5: 2fec61af9088f2727e5e78820e2b6e6c The proposed and approved taxonomy changes in table format required by The International Committee on Taxonomy of Viruses (ICTV).
2024.003D.Polyomaviridae_4ns.pdf Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Adobe PDF - 456.8 KB - MD5: a332e5c5679f6faf3a0cb115cc77c3d6 The taxonomy proposal itself approved by The International Committee on Taxonomy of Viruses (ICTV).
ICTVTree.fasta Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Unknown - 391.7 KB - MD5: 761d91cef0dbb19625e6a8f1bbcd2c72 ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with 4 LTAg (Large Tumor Antigen) gene nucleotide sequences of the polyomaviruses discussed in the proposal.
ICTVTree.nwk Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Unknown - 8.0 KB - MD5: b1a2a7b4b04e6459df3318ac57d167ba Phylogenetic tree reconstruction results in Newick format, based on LTAg (Large Tumor Antigen) gene nucleotide sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.
ICTVTree_einsi.fasta Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Unknown - 637.6 KB - MD5: e913dc65c66cc2463a902cbde641731a Multiple alignment of LTAg (Large Tumor Antigen) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, including the 4 polyomaviruses discussed in the proposal, using MAFFT 7.49 with the E-INS-i algorithm.
Read_me.txt Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns) Plain Text - 2.4 KB - MD5: f2d04ac2ed25503559fa991932df3899 Information file.
FigS1.png Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus PNG Image - 218.0 KB - MD5: aa9bda21d86f51953716b8dbe9974619 Phylogenetic tree based on the nucleotide sequences of entire VP1 genes.
FigureS1_Description.txt Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Plain Text - 606 B - MD5: b3dcbc11b6a6da5029fda9a4d975c658 Figure description for supplementary figure 1 (FigureS1).
LTAg_eins.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 575.1 KB - MD5: 85535f89cb425aa0f0760821355c6b71 Multiple alignment of LTAg (Large Tumor Antigen) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, including the the Castor fiber polyomavirus 1, using MAFFT 7.49 with the E-INS-i algorithm.
LTAg_seq.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 371.9 KB - MD5: 26b18b21c06a2a8967413a6e348ac367 ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with the Castor fiber polyomavirus 1 LTAg (Large Tumor Antigen) gene nucleotide sequence.

2024.003D.Polyomaviridae_4ns.csv

Nov 19, 2025 - Phylogenetic dataset and documents for the ICTV Taxonomy Proposal: Create 4 new species in the genera Alphapolyomavirus and Betapolyomavirus (Polyomaviridae) (2024.003D.Polyomaviridae_4ns)

Comma Separated Values - 2.1 KB -

The proposed and approved taxonomy changes in table format required by The International Committee on Taxonomy of Viruses (ICTV).

2024.003D.Polyomaviridae_4ns.pdf

Adobe PDF - 456.8 KB -

The taxonomy proposal itself approved by The International Committee on Taxonomy of Viruses (ICTV).

ICTVTree.fasta

Unknown - 391.7 KB -

ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with 4 LTAg (Large Tumor Antigen) gene nucleotide sequences of the polyomaviruses discussed in the proposal.

ICTVTree.nwk

Unknown - 8.0 KB -

Phylogenetic tree reconstruction results in Newick format, based on LTAg (Large Tumor Antigen) gene nucleotide sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.

ICTVTree_einsi.fasta

Unknown - 637.6 KB -

Multiple alignment of LTAg (Large Tumor Antigen) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, including the 4 polyomaviruses discussed in the proposal, using MAFFT 7.49 with the E-INS-i algorithm.

Read_me.txt

Plain Text - 2.4 KB -

Information file.

FigS1.png

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

PNG Image - 218.0 KB -

Phylogenetic tree based on the nucleotide sequences of entire VP1 genes.

FigureS1_Description.txt

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Plain Text - 606 B -

Figure description for supplementary figure 1 (FigureS1).

LTAg_eins.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 575.1 KB -

Multiple alignment of LTAg (Large Tumor Antigen) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, including the the Castor fiber polyomavirus 1, using MAFFT 7.49 with the E-INS-i algorithm.

LTAg_seq.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 371.9 KB -

ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with the Castor fiber polyomavirus 1 LTAg (Large Tumor Antigen) gene nucleotide sequence.

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