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Publication Year: 2025

211 to 220 of 20,223 Results

LTAg_seq.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 371.9 KB - MD5: 26b18b21c06a2a8967413a6e348ac367 ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with the Castor fiber polyomavirus 1 LTAg (Large Tumor Antigen) gene nucleotide sequence.
LTAg_tree.nwk Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 7.4 KB - MD5: 2ed2bbb8c15927cc5d32dfeb19264d78 Phylogenetic tree reconstruction results in Newick format, based on LTAg (Large Tumor Antigen) gene sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.
Read_me.txt Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Plain Text - 3.9 KB - MD5: 61700c13653e1aa90844dcf43a837d22 Information file.
VP1_fftnsi.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 231.5 KB - MD5: 32f9f41d84800c21554a1709978d291c Multiple alignment of VP1 (major capsid protein) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, using MAFFT 7.49 with the FFT-NS-i algorithm.
VP1_seq.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 136.7 KB - MD5: 23688e0a47039960342b5ac0e5c0b4dd Raw VP1 (major capsid protein) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis.
VP1_tree.nwk Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus Unknown - 7.5 KB - MD5: 6d67b88b31619f54d020a03651720138 Phylogenetic tree reconstruction results in Newick format, based on VP1 (major capsid protein) gene sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.
Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe Nov 12, 2025 - Molecular Virology Dataverse Surján, András; Vidovszky, Márton; Gellért, Ákos; Harrach, Balázs, 2025, "Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe", https://hdl.handle.net/21.15109/ARP/99AJTE, ARP, V1 Polyomaviruses (PyVs) are known to infect a diverse range of vertebrate host species. We report the discovery of PyVs in vesper bats (family Vespertilionidae) from sampling in Central Europe. Seven partial VP1 sequences from different PyVs were detected in samples originating fro...
FigureS1.tif Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe TIFF Image - 4.9 MB - MD5: 5f251977daf75602f90aae80b90c96af Molecular docking method validation.
FigureS1_Description.txt Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe Plain Text - 1.1 KB - MD5: d2cd51b6e5d3096e334fb144a91c78a1 Figure description for supplementary figure 1 (FigureS1).
LTAg_eins.fasta Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe Unknown - 117.3 KB - MD5: e23c75282b637c9fa3890d5f1519905f Multiple alignment of LTAg (Large Tumor Antigen) gene amino acid sequences of polyomaviruses used for phylogenetic analysis, using MAFFT 7.49 with the E-INS-i algorithm.

LTAg_seq.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 371.9 KB -

ICTV Report on the family: Polyomaviridae resource file, alignment file used for the inference of the phylogenetic tree seen in the report, augmented with the Castor fiber polyomavirus 1 LTAg (Large Tumor Antigen) gene nucleotide sequence.

LTAg_tree.nwk

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 7.4 KB -

Phylogenetic tree reconstruction results in Newick format, based on LTAg (Large Tumor Antigen) gene sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.

Read_me.txt

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Plain Text - 3.9 KB -

Information file.

VP1_fftnsi.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 231.5 KB -

Multiple alignment of VP1 (major capsid protein) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis, using MAFFT 7.49 with the FFT-NS-i algorithm.

VP1_seq.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 136.7 KB -

Raw VP1 (major capsid protein) gene nucleotide sequences of polyomaviruses used for phylogenetic analysis.

VP1_tree.nwk

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2024. Eurasian beaver polyomavirus

Unknown - 7.5 KB -

Phylogenetic tree reconstruction results in Newick format, based on VP1 (major capsid protein) gene sequences, using PhyML 3.3.1, with GTR+G+I model, SPR for topology and SH-like aLRT method for branch support.

Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe

Nov 12, 2025 - Molecular Virology Dataverse

Surján, András; Vidovszky, Márton; Gellért, Ákos; Harrach, Balázs, 2025, "Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe", https://hdl.handle.net/21.15109/ARP/99AJTE, ARP, V1

Polyomaviruses (PyVs) are known to infect a diverse range of vertebrate host species. We report the discovery of PyVs in vesper bats (family Vespertilionidae) from sampling in Central Europe. Seven partial VP1 sequences from different PyVs were detected in samples originating fro...

FigureS1.tif

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe

TIFF Image - 4.9 MB -

Molecular docking method validation.

FigureS1_Description.txt

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe

Plain Text - 1.1 KB -

Figure description for supplementary figure 1 (FigureS1).

LTAg_eins.fasta

Nov 12, 2025 - Phylogenetic dataset and supplementary material for Surján et al. 2023. Vesper bat polyomaviruses in Central Europe

Unknown - 117.3 KB -

Multiple alignment of LTAg (Large Tumor Antigen) gene amino acid sequences of polyomaviruses used for phylogenetic analysis, using MAFFT 7.49 with the E-INS-i algorithm.

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